Estimation of (Local) False Discovery Rates and Higher Criticism

Estimates both tail area-based false 
   discovery rates (Fdr) as well as local false discovery rates (fdr) for a 
   variety of null models (p-values, z-scores, correlation coefficients,
   t-scores).  The proportion of null values and the parameters of the null 
   distribution are adaptively estimated from the data.  In addition, the package 
   contains functions for non-parametric density estimation (Grenander estimator), 
   for monotone regression (isotonic regression and antitonic regression with weights),
   for computing the greatest convex minorant (GCM) and the least concave majorant (LCM), 
   for the half-normal and correlation distributions, and for computing
   empirical higher criticism (HC) scores and the corresponding decision threshold.

Duncan Temple Lang and the CRAN Team (including Tomas Kalibera)

Tools for Parsing and Generating XML Within R and S-Plus

Many approaches for both reading and
        creating XML (and HTML) documents (including DTDs), both local
        and accessible via HTTP or FTP.  Also offers access to an
        'XPath' "interpreter".

AAA.R DTD.R DTDClasses.R DTDRef.R SAXMethods.S XMLClasses.R
applyDOM.R assignChild.R catalog.R createNode.R dynSupports.R
error.R flatTree.R nodeAccessors.R parseDTD.R schema.S
summary.R tangle.R toString.S tree.R version.R xmlErrorEnums.R
xmlEventHandler.R xmlEventParse.R xmlHandler.R
xmlInternalSource.R xmlOutputDOM.R xmlNodes.R xmlOutputBuffer.R
xmlTree.R xmlTreeParse.R htmlParse.R hashTree.R zzz.R
supports.R parser.R libxmlFeatures.R xmlString.R saveXML.R
namespaces.R readHTMLTable.R reflection.R xmlToDataFrame.R
bitList.R compare.R encoding.R fixNS.R xmlRoot.R serialize.R
xmlMemoryMgmt.R keyValueDB.R solrDocs.R XMLRErrorInfo.R
xincludes.R namespaceHandlers.R tangle1.R htmlLinks.R
htmlLists.R getDependencies.R getRelativeURL.R xmlIncludes.R
simplifyPath.R

Orphaned on 2017-06-19: all updates have been by the
CRAN team for some years.